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Brad, publishing the Project from MS Project will do the trick and update the Project Type field in the Server from ‘Sub Project’ to ‘Project’.
When you delete Master Projects from server, the related Sub Projects remain with this classification in the Project Type field. And publishing in PWA is useless in this case.
Hunter, you can skip steps 2) to 5). They do represent a more proper way, but in most cases deleting the Sub Project line and then Publishing works fine.
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